About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16403-
Paelopatides16404PROTEIN CBG26694
Paelopatides1640552 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides16409ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides16410ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides16411REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16412-
Paelopatides16413-
Paelopatides16414PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides16415REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16416-
Paelopatides16417FORKHEAD BOX PROTEIN J1
Paelopatides16418-
Paelopatides16419-
Paelopatides16420SENSOR KINASE-RELATED
Paelopatides16421PKSB
Paelopatides16422PKSB
Paelopatides16423PKSB
Paelopatides16424TBC1 DOMAIN FAMILY MEMBER 20/GTPASE
Paelopatides16425PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
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