About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16446REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16447CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED
Paelopatides16448-
Paelopatides16449PROTEIN QUA-1-RELATED
Paelopatides16450ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides16451FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides16452PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
Paelopatides16453DNA2/NAM7 HELICASE FAMILY
Paelopatides16454DNA2/NAM7 HELICASE FAMILY
Paelopatides16455-
Paelopatides16456ENDONUCLEASE-RELATED
Paelopatides16457-
Paelopatides16458HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides16459REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16460NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides16461CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides16462NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides16463TELOMERASE PROTEIN COMPONENT 1 TEP1
Paelopatides16464GAG-RELATED PROTEIN
Paelopatides16465GAG-RELATED PROTEIN
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