About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides18138FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides1813952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides18140REVERSE TRANSCRIPTASES
Paelopatides18141-
Paelopatides18144-
Paelopatides18145-
Paelopatides18146OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides18147-
Paelopatides18148-
Paelopatides18149-
Paelopatides18150P53 AND DNA DAMAGE-REGULATED PROTEIN
Paelopatides18151CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides18152PROTEIN CBG26694
Paelopatides18153PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides18154PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides18155PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides18156PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides18157PROTEIN CBG26694
Paelopatides18158PARANEOPLASTIC ANTIGEN
Paelopatides18159CXC DOMAIN-CONTAINING PROTEIN-RELATED
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