About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19174CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides19175PROTEIN CBG26694
Paelopatides19176-
Paelopatides19177-
Paelopatides19178RFX TRANSCRIPTION FACTOR FAMILY
Paelopatides19179-
Paelopatides19180U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD
Paelopatides19181REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19182EPM2A-INTERACTING PROTEIN 1
Paelopatides19183REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19184NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides19185PROTEIN CBG26694
Paelopatides19186-
Paelopatides19187-
Paelopatides19188FI18240P1-RELATED
Paelopatides19192ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides19193-
Paelopatides19194PROTEIN CBG26694
Paelopatides19195FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides19196BUCENTAUR RELATED
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