About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19239FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides19240PROTEIN CBG26694
Paelopatides19241-
Paelopatides19242ENDONUCLEASE
Paelopatides19243HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides19244TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides19245EG:EG0003.4 PROTEIN-RELATED
Paelopatides19246B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides19250-
Paelopatides19251-
Paelopatides19252REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19253-
Paelopatides19254FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides19255FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides19256PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides19257-
Paelopatides19258WSCD FAMILY MEMBER CG9164
Paelopatides19259ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides19260ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides19261POL PROTEIN
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