About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19061REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19062ARYLSULFATASE FAMILY MEMBER
Paelopatides19063PROTEIN CBG26694
Paelopatides19064ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides19065ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides19066AGAP005574-PA
Paelopatides19067SI:CH211-108C17.2-RELATED-RELATED
Paelopatides19068ZGC:195170
Paelopatides19069CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides19070-
Paelopatides19073REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19074-
Paelopatides19075S -2-HYDROXY-ACID OXIDASE-RELATED
Paelopatides19076-
Paelopatides19077PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides19078PROTEIN CBG26694
Paelopatides19079PROTEIN CBG26694
Paelopatides19080-
Paelopatides19081DNA HELICASE RECQ FAMILY MEMBER
Paelopatides19082ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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