About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19305-
Paelopatides19306NETRIN RECEPTOR UNC5
Paelopatides19307NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides19308REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19309-
Paelopatides19310-
Paelopatides19311-
Paelopatides19312REVERSE TRANSCRIPTASES
Paelopatides19313REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19314THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1
Paelopatides19315-
Paelopatides19316-
Paelopatides19317BUCENTAUR RELATED
Paelopatides19318-
Paelopatides19320PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides19322-
Paelopatides19323-
Paelopatides19324-
Paelopatides19325COMM DOMAIN CONTAINING PROTEIN 5
Paelopatides19326POL PROTEIN
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