About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20836-
Paelopatides20848-
Paelopatides20849EPM2A-INTERACTING PROTEIN 1
Paelopatides20850PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides20851-
Paelopatides20852SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides20853SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides20854-
Paelopatides20855-
Paelopatides20856SUSHI DOMAIN-CONTAINING PROTEIN 3
Paelopatides20857-
Paelopatides20858-
Paelopatides20859-
Paelopatides20860NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides20861-
Paelopatides20862PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides20863RNA BINDING PROTEIN PUMILIO-RELATED
Paelopatides20864PROTEIN CBG26694
Paelopatides20865REVERSE TRANSCRIPTASE
Paelopatides20867-
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