About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20730REVERSE TRANSCRIPTASES
Paelopatides20731-
Paelopatides20732-
Paelopatides20733NETRIN RECEPTOR UNC5
Paelopatides20734-
Paelopatides20735RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides20736RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides20737RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides20738-
Paelopatides20739-
Paelopatides20740-
Paelopatides20741REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20742-
Paelopatides20743COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Paelopatides20744FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides20745-
Paelopatides20746POL PROTEIN
Paelopatides20747-
Paelopatides20748BETA TRANSDUCIN-RELATED PROTEIN
Paelopatides20749BETA TRANSDUCIN-RELATED PROTEIN
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