About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23628EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides23629FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides23630-
Paelopatides23631ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides23632-
Paelopatides23633-
Paelopatides23634CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA
Paelopatides23635-
Paelopatides23636ENDONUCLEASE-RELATED
Paelopatides23637TITIN
Paelopatides23638CONTACTIN 5
Paelopatides23639ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Paelopatides23640-
Paelopatides23641DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides23642EPM2A-INTERACTING PROTEIN 1
Paelopatides23645CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides23646-
Paelopatides23647-
Paelopatides23648PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides23650-
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