About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23585RIKEN CDNA D130052B06 GENE
Paelopatides23586ALPHA-CATULIN
Paelopatides23587ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides23588NUCLEAR PROTEIN E3-3
Paelopatides23589-
Paelopatides23590PROTEIN CBG26694
Paelopatides23591ENZYMATIC POLYPROTEIN-RELATED
Paelopatides23592PROTEIN CBG26694
Paelopatides23593PROTEIN CBG26694
Paelopatides23595-
Paelopatides23596-
Paelopatides23597-
Paelopatides23598ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides23599GAG-RELATED PROTEIN
Paelopatides23600POPEYE DOMAIN CONTAINING PROTEIN
Paelopatides23601PROTEIN CBG26694
Paelopatides23602ENDONUCLEASE
Paelopatides23604-
Paelopatides23605SI:CH211-108C17.2-RELATED-RELATED
Paelopatides23606PROTEIN CBG26694
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