About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23503-
Paelopatides23504-
Paelopatides23505TNF RECEPTOR ASSOCIATED FACTOR
Paelopatides23506-
Paelopatides23507SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides23509SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides23510EPH RECEPTOR A5
Paelopatides23511-
Paelopatides23512EPH RECEPTOR A5
Paelopatides23513PHOSPHATIDYLINOSITOL KINASE
Paelopatides23514-
Paelopatides23515-
Paelopatides23516NETRIN RECEPTOR UNC5
Paelopatides23517-
Paelopatides23518-
Paelopatides23519BETA-CAROTENE DIOXYGENASE
Paelopatides23520ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Paelopatides23521PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides23523PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides23524-
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