About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23607PROTEIN CBG26694
Paelopatides23608PROTEIN CBG26694
Paelopatides23609TETHER CONTAINING UBX DOMAIN FOR GLUT4
Paelopatides23610THAP DOMAIN-CONTAINING
Paelopatides23611BUCENTAUR RELATED
Paelopatides23612PROTEIN CBG26694
Paelopatides23613PARANEOPLASTIC ANTIGEN
Paelopatides23614ENDONUCLEASE-RELATED
Paelopatides23615POL PROTEIN
Paelopatides23616RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides23617PROTEIN CBG26694
Paelopatides23618-
Paelopatides23619-
Paelopatides23621PROTEIN CBG26694
Paelopatides23622PROTEIN CBG26694
Paelopatides23623SYNAPTIC ADHESION-LIKE MOLECULE SALM
Paelopatides23624PROTEIN CBG26694
Paelopatides23625PROPERDIN
Paelopatides23626L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides23627-
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