About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24006REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24008TRANSCRIPTION FACTOR 7 FAMILY MEMBER
Paelopatides24009REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24010ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides24011-
Paelopatides24012-
Paelopatides24013-
Paelopatides24014GABA-B RECEPTOR
Paelopatides24015GABA-B RECEPTOR
Paelopatides24016GABA-B RECEPTOR
Paelopatides24017MITOCHONDRIAL RIBOSOMAL PROTEIN L30
Paelopatides24018ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24019RETROTRANSPOSON
Paelopatides24020PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides24021-
Paelopatides24025-
Paelopatides24026PROTEIN CBG26694
Paelopatides24027PROTEIN CBG26694
Paelopatides24028-
Paelopatides24029ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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