About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24030PARANEOPLASTIC ANTIGEN
Paelopatides24031F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides24032-
Paelopatides24033REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24034ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24035-
Paelopatides24037TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
Paelopatides24038-
Paelopatides24039-
Paelopatides24040REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24041TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides24042MIR-INTERACTING SAPOSIN-LIKE PROTEIN
Paelopatides24043HOMEO BOX HB9 LIKE A-RELATED
Paelopatides24044DNA HELICASE RECQ FAMILY MEMBER
Paelopatides24045UNCHARACTERIZED
Paelopatides24046DEOXYHYPUSINE SYNTHASE
Paelopatides24047-
Paelopatides24048DEOXYHYPUSINE SYNTHASE
Paelopatides24049ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides24050-
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