About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24071ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24072EXPRESSED PROTEIN
Paelopatides24073-
Paelopatides24074PHOSPHOLIPID ACYLTRANSFERASE
Paelopatides24075PHOSPHOLIPID ACYLTRANSFERASE
Paelopatides24076-
Paelopatides24077-
Paelopatides24078PROTEIN CBG26694
Paelopatides24079ENDONUCLEASE
Paelopatides24080ENDONUCLEASE
Paelopatides24081GAG-RELATED PROTEIN
Paelopatides24082-
Paelopatides24083ZGC:195170
Paelopatides24085-
Paelopatides24086-
Paelopatides24087HOOK PROTEINS
Paelopatides24088TRANSPOSABLE ELEMENT-RELATED
Paelopatides24089TRANSPOSABLE ELEMENT-RELATED
Paelopatides24090PHOSPHODIESTERASE HL
Paelopatides24091ATP SYNTHASE GAMMA-RELATED
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