About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23864EPM2A-INTERACTING PROTEIN 1
Paelopatides23865REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides23866ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides23867-
Paelopatides23868ENDONUCLEASE-RELATED
Paelopatides23869POL PROTEIN
Paelopatides23870-
Paelopatides23876EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7
Paelopatides23877EPM2A-INTERACTING PROTEIN 1
Paelopatides23878HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides23879PROTEIN CBG26694
Paelopatides23881ANTERIOR GRADIENT PROTEIN-RELATED
Paelopatides23882EXPRESSED PROTEIN
Paelopatides23883GAG-RELATED PROTEIN
Paelopatides23884-
Paelopatides23885-
Paelopatides23886HISTONE H2B
Paelopatides23887HISTONE H2A
Paelopatides23888-
Paelopatides23889TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
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