About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23913OS05G0310600 PROTEIN
Paelopatides23914-
Paelopatides23915ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides23916ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides23917EPM2A-INTERACTING PROTEIN 1
Paelopatides23918COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides23919-
Paelopatides23920-
Paelopatides23921PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides23922ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides23923MULTICOPPER OXIDASE-RELATED
Paelopatides23924-
Paelopatides23925SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN
Paelopatides23926PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides23927RETROTRANSPOSON
Paelopatides23928REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides23929TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides23930-
Paelopatides23931-
Paelopatides23932-
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