About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.

Classification

Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)

Original Name

Ostrea magellanica Gmelin, 1791

Original Description/Redescription

1. Gmelin J F. Caroli Linnaei systema naturae per regna fria naturae. Ed. 13, aucta, reformata, Vermes Testacea[J]. Lipsiae, 1791, 1(6): 3021-3910. (Gmelin et al., 1791)

Partial Description

The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.

Distribution/Locality

51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10 86,713/6,53538.0643.0428,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000131l.28RAS-RELATED PROTEIN RAB
PMEG.utg000131l.29ARMADILLO-TYPE FOLD-RELATED
PMEG.utg000131l.3UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
PMEG.utg000131l.30TETRATRICOPEPTIDE REPEAT PROTEIN 22
PMEG.utg000131l.31NEURALIZED
PMEG.utg000131l.32CLASS IV SAM-BINDING METHYLTRANSFERASE-RELATED
PMEG.utg000131l.33RALA BINDING PROTEIN 1 RALBP1
PMEG.utg000131l.34G PATCH DOMAIN CONTAINING PROTEIN
PMEG.utg000131l.35OXIDASE/PEROXIDASE
PMEG.utg000131l.36OXIDASE/PEROXIDASE
PMEG.utg000131l.37ALPHA KINASE/ELONGATION FACTOR 2 KINASE
PMEG.utg000131l.38ALPHA KINASE/ELONGATION FACTOR 2 KINASE
PMEG.utg000131l.4SIN3B-RELATED
PMEG.utg000131l.40CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB
PMEG.utg000131l.41M-AAA PROTEASE-INTERACTING PROTEIN 1, MITOCHONDRIAL
PMEG.utg000131l.5SMAD
PMEG.utg000131l.6LEO1 PROTEIN
PMEG.utg000131l.7
PMEG.utg000131l.8
PMEG.utg000131l.9PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
PMEG.utg000132l.1WD REPEAT PROTEIN
PMEG.utg000132l.2SRCR DOMAIN-CONTAINING PROTEIN
PMEG.utg000132l.3ALANYL-TRNA SYNTHETASE
PMEG.utg000132l.4PROTEASE M1 ZINC METALLOPROTEASE
PMEG.utg000132l.5GLUTAMATE SEMIALDEHYDE DEHYDROGENASE
PMEG.utg000132l.6GLUTAMATE SEMIALDEHYDE DEHYDROGENASE
PMEG.utg000132l.7ENDO-1,4-BETA-GLUCANASE
PMEG.utg000132l.8
PMEG.utg000133l.1GLYCOGEN PHOSPHORYLASE
PMEG.utg000133l.10RHO FAMILY GTPASE
PMEG.utg000133l.11RHO FAMILY GTPASE
PMEG.utg000133l.12RHO FAMILY GTPASE
PMEG.utg000133l.13PROLYL-TRNA SYNTHETASE
PMEG.utg000133l.14SPERMATOGENESIS-ASSOCIATED PROTEIN 7
PMEG.utg000133l.2TRANSMEMBRANE PROTEIN 179
PMEG.utg000133l.3NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED
PMEG.utg000133l.4PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4
PMEG.utg000133l.5THIOREDOXIN DOMAIN-CONTAINING PROTEIN 16
PMEG.utg000133l.6FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER
PMEG.utg000133l.7
PMEG.utg000133l.8ALDOSE-1-EPIMERASE
PMEG.utg000133l.9SER/THR PROTEIN KINASE ULK4
PMEG.utg000134l.1MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L42
PMEG.utg000134l.2TRNA PSEUDOURIDINE SYNTHASE D
PMEG.utg000134l.3TRNA PSEUDOURIDINE SYNTHASE D
PMEG.utg000134l.4VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
PMEG.utg000135l.1
PMEG.utg000135l.10UBIQUITIN-ACTIVATING ENZYME E1
PMEG.utg000135l.100PHOSPHATIDYLINOSITOL KINASE
PMEG.utg000135l.101CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2
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