The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)
Ostrea magellanica Gmelin, 1791
1. Gmelin J F. Caroli Linnaei systema naturae per regna fria naturae. Ed. 13, aucta, reformata, Vermes Testacea[J]. Lipsiae, 1791, 1(6): 3021-3910. (Gmelin et al., 1791)
The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.
51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
---|---|---|---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10 | 86,713/6,535 | 38.06 | 43.04 | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000131l.28 | RAS-RELATED PROTEIN RAB |
PMEG.utg000131l.29 | ARMADILLO-TYPE FOLD-RELATED |
PMEG.utg000131l.3 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
PMEG.utg000131l.30 | TETRATRICOPEPTIDE REPEAT PROTEIN 22 |
PMEG.utg000131l.31 | NEURALIZED |
PMEG.utg000131l.32 | CLASS IV SAM-BINDING METHYLTRANSFERASE-RELATED |
PMEG.utg000131l.33 | RALA BINDING PROTEIN 1 RALBP1 |
PMEG.utg000131l.34 | G PATCH DOMAIN CONTAINING PROTEIN |
PMEG.utg000131l.35 | OXIDASE/PEROXIDASE |
PMEG.utg000131l.36 | OXIDASE/PEROXIDASE |
PMEG.utg000131l.37 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
PMEG.utg000131l.38 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
PMEG.utg000131l.4 | SIN3B-RELATED |
PMEG.utg000131l.40 | CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB |
PMEG.utg000131l.41 | M-AAA PROTEASE-INTERACTING PROTEIN 1, MITOCHONDRIAL |
PMEG.utg000131l.5 | SMAD |
PMEG.utg000131l.6 | LEO1 PROTEIN |
PMEG.utg000131l.7 | |
PMEG.utg000131l.8 | |
PMEG.utg000131l.9 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
PMEG.utg000132l.1 | WD REPEAT PROTEIN |
PMEG.utg000132l.2 | SRCR DOMAIN-CONTAINING PROTEIN |
PMEG.utg000132l.3 | ALANYL-TRNA SYNTHETASE |
PMEG.utg000132l.4 | PROTEASE M1 ZINC METALLOPROTEASE |
PMEG.utg000132l.5 | GLUTAMATE SEMIALDEHYDE DEHYDROGENASE |
PMEG.utg000132l.6 | GLUTAMATE SEMIALDEHYDE DEHYDROGENASE |
PMEG.utg000132l.7 | ENDO-1,4-BETA-GLUCANASE |
PMEG.utg000132l.8 | |
PMEG.utg000133l.1 | GLYCOGEN PHOSPHORYLASE |
PMEG.utg000133l.10 | RHO FAMILY GTPASE |
PMEG.utg000133l.11 | RHO FAMILY GTPASE |
PMEG.utg000133l.12 | RHO FAMILY GTPASE |
PMEG.utg000133l.13 | PROLYL-TRNA SYNTHETASE |
PMEG.utg000133l.14 | SPERMATOGENESIS-ASSOCIATED PROTEIN 7 |
PMEG.utg000133l.2 | TRANSMEMBRANE PROTEIN 179 |
PMEG.utg000133l.3 | NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED |
PMEG.utg000133l.4 | PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 |
PMEG.utg000133l.5 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 16 |
PMEG.utg000133l.6 | FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER |
PMEG.utg000133l.7 | |
PMEG.utg000133l.8 | ALDOSE-1-EPIMERASE |
PMEG.utg000133l.9 | SER/THR PROTEIN KINASE ULK4 |
PMEG.utg000134l.1 | MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L42 |
PMEG.utg000134l.2 | TRNA PSEUDOURIDINE SYNTHASE D |
PMEG.utg000134l.3 | TRNA PSEUDOURIDINE SYNTHASE D |
PMEG.utg000134l.4 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
PMEG.utg000135l.1 | |
PMEG.utg000135l.10 | UBIQUITIN-ACTIVATING ENZYME E1 |
PMEG.utg000135l.100 | PHOSPHATIDYLINOSITOL KINASE |
PMEG.utg000135l.101 | CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2 |