About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24332ORGANIC ANION TRANSPORTER
Paelopatides24333HEAT SHOCK PROTEIN 70KDA
Paelopatides24334HEAT SHOCK PROTEIN 70KDA
Paelopatides24335YIPPEE DOMAIN-CONTAINING PROTEIN
Paelopatides24336-
Paelopatides24337TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
Paelopatides24339-
Paelopatides24340REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24341DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides24342SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides24343RAS-RELATED PROTEIN RAB
Paelopatides24344-
Paelopatides24345-
Paelopatides24346ENDONUCLEASE
Paelopatides24347REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24348TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
Paelopatides24349-
Paelopatides24350POL PROTEIN
Paelopatides24351NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Paelopatides24352-
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