About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24292-
Paelopatides24293BONUS, ISOFORM C-RELATED
Paelopatides24294-
Paelopatides24295SODIUM/NUCLEOSIDE COTRANSPORTER
Paelopatides24296-
Paelopatides24297EXTRA SPINDLE POLES 1-RELATED
Paelopatides24298-
Paelopatides24299PROTEIN CBG23806
Paelopatides24300-
Paelopatides24301-
Paelopatides24302-
Paelopatides24303-
Paelopatides24304-
Paelopatides24305ACROSIN-RELATED
Paelopatides24306ARGININE OR CREATINE KINASE
Paelopatides24307CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
Paelopatides24308-
Paelopatides24309TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides24310TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides24311-
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