About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24353-
Paelopatides24354THAP DOMAIN PROTEIN
Paelopatides24355CONDENSIN-2 COMPLEX SUBUNIT H2
Paelopatides24356ENZYMATIC POLYPROTEIN-RELATED
Paelopatides24357ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides24358-
Paelopatides24359MYOSIN HEAVY CHAIN, NON-MUSCLE
Paelopatides24360PROTEIN CBG26694
Paelopatides24361PROTEIN CBG26694
Paelopatides24362PARANEOPLASTIC ANTIGEN
Paelopatides24363ENZYMATIC POLYPROTEIN-RELATED
Paelopatides24364-
Paelopatides24365-
Paelopatides24366-
Paelopatides24367-
Paelopatides24369HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
Paelopatides24370CARDIOLIPIN HYDROLASE
Paelopatides24371OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides24372-
Paelopatides24373ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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