About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24272CHROMOSOME 12 ORF 43 HOMOLOG
Paelopatides24273UNCHARACTERIZED
Paelopatides24274RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides24275ATP-DEPENDENT DNA HELICASE
Paelopatides24276PARANEOPLASTIC ANTIGEN
Paelopatides24277-
Paelopatides24278UBIQUITIN-CONJUGATING ENZYME E2
Paelopatides24279-
Paelopatides24280-
Paelopatides24281SPLICING FACTOR 45 SPF45
Paelopatides24282SPLICING FACTOR 45 SPF45
Paelopatides24283TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 6-RELATED
Paelopatides24284TAZ PROTEIN TAFAZZIN
Paelopatides24285MOLTING PROTEIN MLT-4
Paelopatides24286EXPRESSED PROTEIN
Paelopatides24287-
Paelopatides24288DALRD3 PROTEIN
Paelopatides24289DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides24290METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides24291FI04643P-RELATED
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