About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24394-
Paelopatides24395G PROTEIN-COUPLED RECEPTOR
Paelopatides24396PEPTIDASE S8
Paelopatides24397PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides24400-
Paelopatides24401RETROTRANSPOSON
Paelopatides24402RETROTRANSPOSON
Paelopatides24403-
Paelopatides24406GAG-RELATED PROTEIN
Paelopatides24407G-PROTEIN COUPLED RECEPTOR
Paelopatides24408ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24409UNCHARACTERIZED
Paelopatides24410SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides24411-
Paelopatides24412-
Paelopatides24413-
Paelopatides24414REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24415ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED
Paelopatides24416-
Paelopatides24417-
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