About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24418PROTEIN CBG26694
Paelopatides24419GAG-RELATED PROTEIN
Paelopatides24420-
Paelopatides24421-
Paelopatides24422-
Paelopatides24423TRANSPOSABLE ELEMENT-RELATED
Paelopatides24424-
Paelopatides24425MULTI-COPPER OXIDASE
Paelopatides24426MULTI-COPPER OXIDASE
Paelopatides24427MULTI-COPPER OXIDASE
Paelopatides24428MULTI-COPPER OXIDASE
Paelopatides24429FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides24430C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides24431REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24432REVERSE TRANSCRIPTASES
Paelopatides24433-
Paelopatides24434REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24435-
Paelopatides24436-
Paelopatides24437SI:CH211-196P9.1-RELATED
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