About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25052HISTONE DEACETYLASE 2-RELATED
Paelopatides25053SI:CH211-196P9.1-RELATED
Paelopatides25054-
Paelopatides25055T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Paelopatides25056CULLIN
Paelopatides25057CULLIN
Paelopatides25058CULLIN
Paelopatides25059SI:CH211-196P9.1-RELATED
Paelopatides25060FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides25061UNCHARACTERIZED
Paelopatides25062PROTEIN CBG26694
Paelopatides25063PROTEIN CBG26694
Paelopatides25064PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED
Paelopatides25065-
Paelopatides25066ACETYL-COA C-ACYLTRANSFERASE
Paelopatides25067TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT
Paelopatides25068REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25069GTP-BINDING
Paelopatides25070AMINO ACID TRANSPORTER
Paelopatides2507115-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)]
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