About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25010APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Paelopatides25011ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides25012ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides25013POL PROTEIN
Paelopatides25014ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides25015PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides25016-
Paelopatides25017-
Paelopatides25018EPM2A-INTERACTING PROTEIN 1
Paelopatides25019PROTEIN CBG26694
Paelopatides25020CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides25021CENTROSOME SPINDLE POLE ASSOCIATED PROTEIN
Paelopatides25024-
Paelopatides25025NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
Paelopatides25026PROTEIN FAM207A
Paelopatides25027-
Paelopatides25028PROTEIN CBG26694
Paelopatides25029IP01015P-RELATED
Paelopatides25030SERINE/THREONINE-PROTEIN KINASE 17
Paelopatides25031REVERSE TRANSCRIPTASE
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