About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25104REVERSE TRANSCRIPTASES
Paelopatides25105-
Paelopatides25106SI:CH211-196P9.1-RELATED
Paelopatides25107ENDONUCLEASE-RELATED
Paelopatides25108CRUMBS FAMILY MEMBER
Paelopatides25109GOLGI REASSEMBLY STACKING PROTEIN GRASP
Paelopatides25110DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Paelopatides25111NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58
Paelopatides25112-
Paelopatides25113HISTONE-LYSINE N-METHYLTRANSFERASE E(Z)
Paelopatides25114HISTONE-LYSINE N-METHYLTRANSFERASE E(Z)
Paelopatides25115-
Paelopatides25116-
Paelopatides25117LEUKOCYTE RECEPTOR CLUSTER MEMBER 9
Paelopatides25118-
Paelopatides25119ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides25120-
Paelopatides25121PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides25122SI:CH211-108C17.2-RELATED-RELATED
Paelopatides25123-
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