About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25144-
Paelopatides25145ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides25146-
Paelopatides25147RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides25148CYTOCHROME P450 FAMILY 3
Paelopatides25149-
Paelopatides25151SUPRABASAL-SPECIFIC PROTEIN SUPRABASIN
Paelopatides25152PROTEIN CBG26694
Paelopatides25153DNA-DIRECTED RNA POLYMERASE
Paelopatides25154C5ORF35
Paelopatides25155TFIIF-ALPHA
Paelopatides25156REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25157REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25158CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides25159CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides25160-
Paelopatides25161-
Paelopatides25162-
Paelopatides25163IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides25164REPLICATION PROTEIN A-RELATED
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