About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25214-
Paelopatides25215POL PROTEIN
Paelopatides25216EUKARYOTIC TRANSLATION INITIATION FACTOR 4E TRANSPORTER
Paelopatides25217-
Paelopatides25218-
Paelopatides25219-
Paelopatides25220RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS
Paelopatides25221BCL-2 RELATED
Paelopatides25222LD39211P
Paelopatides25223BUCENTAUR RELATED
Paelopatides25224REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25225F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides25226-
Paelopatides25227PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides25228GTP-BINDING
Paelopatides25229TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides25230PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides25232PARANEOPLASTIC ANTIGEN
Paelopatides25233-
Paelopatides25234INACTIVE TYROSINE-PROTEIN KINASE 7
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