About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26197-
Paelopatides26198-
Paelopatides26199-
Paelopatides26200CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR
Paelopatides26201REVERSE TRANSCRIPTASES
Paelopatides26202REVERSE TRANSCRIPTASE
Paelopatides26203ARRESTIN
Paelopatides26204TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides26205-
Paelopatides26206TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides26207PARANEOPLASTIC ANTIGEN
Paelopatides26208-
Paelopatides26209-
Paelopatides26210SOLUTE CARRIER FAMILY 39
Paelopatides26211PARANEOPLASTIC ANTIGEN
Paelopatides26212TRYPTOPHAN 2,3-DIOXYGENASE
Paelopatides26213RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides26216-
Paelopatides26217CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides26219GAG-RELATED PROTEIN
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