About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26242-
Paelopatides26243-
Paelopatides26244TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides26245DEOXYRIBONUCLEASE II
Paelopatides26246DEOXYRIBONUCLEASE II
Paelopatides26247TRANSFERRIN
Paelopatides26248TRANSFERRIN
Paelopatides26249TRANSFERRIN
Paelopatides26250UNCHARACTERIZED
Paelopatides26251-
Paelopatides26252PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides26253ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26254CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26255-
Paelopatides26256PROTEIN CBG26694
Paelopatides26257PROTEIN CBG26694
Paelopatides26258BONUS, ISOFORM C-RELATED
Paelopatides26259-
Paelopatides26260PROTEIN CBG26694
Paelopatides26261ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
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