About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26262UNCHARACTERIZED
Paelopatides26263RIBONUCLEASE P PROTEIN SUBUNIT P40
Paelopatides26264GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN PFC0235W
Paelopatides26265ER MEMBRANE PROTEIN COMPLEX
Paelopatides26266CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26267-
Paelopatides26268-
Paelopatides26269SI:CH211-243P7.3-RELATED
Paelopatides26270-
Paelopatides26271FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides26272-
Paelopatides26273TRANSAMIDASE
Paelopatides26274-
Paelopatides26275-
Paelopatides26276-
Paelopatides26277-
Paelopatides26278-
Paelopatides26279RETROTRANSPOSON
Paelopatides26280-
Paelopatides26281PROTEIN C3ORF33
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