About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26057-
Paelopatides26058ENDONUCLEASE
Paelopatides26059OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides26060PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides26061ARSENITE-RESISTANCE PROTEIN 2
Paelopatides26062EPM2A-INTERACTING PROTEIN 1
Paelopatides26063-
Paelopatides26064SEC15
Paelopatides26065SEC15
Paelopatides26066-
Paelopatides26067DNA-DIRECTED RNA POLYMERASE
Paelopatides26068REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26069REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26070-
Paelopatides26071PROTEIN CBG26694
Paelopatides26072ATP-DEPENDENT RNA HELICASE DBP3
Paelopatides26073-
Paelopatides26074-
Paelopatides26075-
Paelopatides26076REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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