About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27181ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27182LD33804P
Paelopatides27183AP ENDONUCLEASE
Paelopatides27184-
Paelopatides27185-
Paelopatides27186PROPERDIN
Paelopatides27187AMINO ACID TRANSPORTER
Paelopatides27188PROTEIN CBG26694
Paelopatides27189AMINO ACID TRANSPORTER
Paelopatides27190TYROSINE-PROTEIN KINASE
Paelopatides27191-
Paelopatides27192GH08155P
Paelopatides27193-
Paelopatides27194REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27195ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27196-
Paelopatides27197ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides27198CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
Paelopatides27199PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides27200PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
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