About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27161-
Paelopatides27162PROTEIN CBG26694
Paelopatides27163PROTEIN CBG26694
Paelopatides27164TRANSPOSASE, PUTATIVE-RELATED
Paelopatides27165-
Paelopatides27166-
Paelopatides27167SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides27168TRANSPOSABLE ELEMENT-RELATED
Paelopatides27169SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides27170-
Paelopatides27171-
Paelopatides27172-
Paelopatides27173DNA POLYMERASE
Paelopatides27174DNA POLYMERASE
Paelopatides27175-
Paelopatides27176UPF0183 PROTEIN
Paelopatides27177G-PROTEIN COUPLED RECEPTOR
Paelopatides27178ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27179EPM2A-INTERACTING PROTEIN 1
Paelopatides27180-
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