About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27137RESISTANCE PROTEIN MDTM, PUTATIVE-RELATED-RELATED
Paelopatides27138PROTEIN SON
Paelopatides27139-
Paelopatides27140-
Paelopatides27141-
Paelopatides27142-
Paelopatides27143FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides27144-
Paelopatides27148-
Paelopatides27149TRANSMEMBRANE PROTEIN KIAA1109
Paelopatides27150TRANSMEMBRANE PROTEIN KIAA1109
Paelopatides27151TRANSMEMBRANE PROTEIN KIAA1109
Paelopatides27152TRANSMEMBRANE PROTEIN KIAA1109
Paelopatides27153RAS-RELATED PROTEIN RAB
Paelopatides27154ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1
Paelopatides27155CYTOKINE RECEPTOR
Paelopatides27156-
Paelopatides27158-
Paelopatides27159ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27160-
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