About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27046CYTOSKELETON ASSOCIATED PROTEIN 2-RELATED
Paelopatides27047STEROL REGULATORY ELEMENT-BINDING PROTEIN
Paelopatides27048-
Paelopatides27049REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27050ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27051-
Paelopatides27052FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides27053ADP-RIBOSYL CYCLASE
Paelopatides27054-
Paelopatides27055PROTEIN ABHD14B-LIKE
Paelopatides27056PROTEIN ABHD14B-LIKE
Paelopatides27057PROTEIN CBG26694
Paelopatides27058-
Paelopatides27059-
Paelopatides27060PROTEIN CBG26694
Paelopatides27061PROTEIN CBG26694
Paelopatides27062PROTEIN CBG26694
Paelopatides27066-
Paelopatides27067REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27069PEPTIDASE S8
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