About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28450UNCHARACTERIZED
Paelopatides28451PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides28452-
Paelopatides28453UNCHARACTERIZED
Paelopatides28454-
Paelopatides28455ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides28456PROTEIN CBG26694
Paelopatides28457-
Paelopatides28458TRANSPOSON
Paelopatides2845952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides28460ADHESION G-PROTEIN COUPLED RECEPTOR
Paelopatides28461-
Paelopatides28462SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides28463-
Paelopatides28464SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2
Paelopatides28465-
Paelopatides28466OXA1
Paelopatides28467CDNA SEQUENCE CN725425
Paelopatides28468SERINE/THREONINE-PROTEIN KINASE PIM
Paelopatides28469PROTEIN CBG26694
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