About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28410PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED
Paelopatides28411THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED
Paelopatides28412-
Paelopatides28413GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides28414-
Paelopatides28415-
Paelopatides28416-
Paelopatides28417ENZYMATIC POLYPROTEIN-RELATED
Paelopatides28418TRANSPOSON
Paelopatides28419SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides28420CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides28421TRANSPOSABLE ELEMENT-RELATED
Paelopatides28422CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides28423-
Paelopatides28424FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides28425-
Paelopatides28426ENZYMATIC POLYPROTEIN-RELATED
Paelopatides28427ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides28428HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides28429TRANSPOSON
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