About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28390GLOMULIN
Paelopatides28391PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides28392-
Paelopatides28393ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE
Paelopatides28394RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Paelopatides28395-
Paelopatides28396-
Paelopatides28397TRANSPOSON
Paelopatides28398-
Paelopatides28399ADHESIN, PUTATIVE-RELATED
Paelopatides28400-
Paelopatides28401DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides28402PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides28403PEPTIDASE
Paelopatides28404SULFURTRANSFERASE-RELATED
Paelopatides28405-
Paelopatides28406NEPHRIN
Paelopatides28407PROTEIN CBG26694
Paelopatides28408-
Paelopatides28409-
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