About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28326L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides28327INHIBITOR OF APOPTOSIS
Paelopatides28328-
Paelopatides28329-
Paelopatides28330-
Paelopatides28332GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Paelopatides28335-
Paelopatides28336HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides28337HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides28338-
Paelopatides28339DNA HELICASE RECQ FAMILY MEMBER
Paelopatides28340GTP-BINDING
Paelopatides28341GTP-BINDING
Paelopatides28342-
Paelopatides28343SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides28344-
Paelopatides28345RIBOFLAVIN TRANSPORTER RIBJ
Paelopatides28346-
Paelopatides28347CYTOCHROME P450 FAMILY 3
Paelopatides28348CYTOCHROME P450 FAMILY 3
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