About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28533-
Paelopatides28534-
Paelopatides28535ANKYRIN REPEAT FAMILY PROTEIN
Paelopatides28536RETROTRANSPOSON
Paelopatides28537RETROTRANSPOSON
Paelopatides28538WD REPEAT-CONTAINING PROTEIN 36
Paelopatides28539-
Paelopatides28540POL PROTEIN
Paelopatides28541-
Paelopatides28542-
Paelopatides28543CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides28544-
Paelopatides28545POL PROTEIN
Paelopatides28546CMF/LEK/CENP CELL DIVISION-RELATED
Paelopatides28547CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED
Paelopatides28548-
Paelopatides28549CMF/LEK/CENP CELL DIVISION-RELATED
Paelopatides28550-
Paelopatides28551-
Paelopatides28552FI04643P-RELATED
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