About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28677TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Paelopatides28678TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Paelopatides28679TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Paelopatides28680GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides28681HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides28682APYRASE
Paelopatides28683NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT
Paelopatides28684-
Paelopatides28685-
Paelopatides28686-
Paelopatides28687SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides28688SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides28689ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides28690SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides28691-
Paelopatides28692-
Paelopatides28693REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides28694-
Paelopatides28695NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER
Paelopatides28696NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER
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