About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28636ZINC FINGER AND BTB DOMAIN-CONTAINING
Paelopatides28637ZINC FINGER PROTEIN
Paelopatides28638ZINC FINGER PROTEIN
Paelopatides28639ZINC FINGER PROTEIN
Paelopatides28641TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Paelopatides28642GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides28643-
Paelopatides28644HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides28645PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides28646FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides28647ATP-BINDING CASSETTE SUB-FAMILY C
Paelopatides28648-
Paelopatides28649-
Paelopatides28650TORSIN
Paelopatides28651KNIRPS-RELATED PROTEIN-RELATED
Paelopatides28652-
Paelopatides28653GH11727P
Paelopatides28654-
Paelopatides28655E3 UBIQUITIN-PROTEIN LIGASE PPP1R11-RELATED
Paelopatides28656SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA
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