About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28657-
Paelopatides28658-
Paelopatides28659CHROMATIN TARGET OF PRMT1 PROTEIN
Paelopatides28660REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides28661ENDONUCLEASE
Paelopatides28662DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides28663-
Paelopatides28664SRC-ASSOCIATED ADAPTOR PROTEIN
Paelopatides28665TRANSPOSABLE ELEMENT-RELATED
Paelopatides28666REVERSE TRANSCRIPTASES
Paelopatides28667BUCENTAUR RELATED
Paelopatides28668TRANSPOSON
Paelopatides28669SI:CH211-196P9.1-RELATED
Paelopatides28670-
Paelopatides28671FI04643P-RELATED
Paelopatides28672MACROGLOBULIN / COMPLEMENT
Paelopatides28673MACROGLOBULIN / COMPLEMENT
Paelopatides28674-
Paelopatides28675ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides28676PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
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