About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28946-
Paelopatides28947ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1
Paelopatides28948-
Paelopatides28949SURFEIT LOCUS PROTEIN
Paelopatides28950TRANSPOSON
Paelopatides28951F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides28952-
Paelopatides28953PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides28954PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides28955EPM2A-INTERACTING PROTEIN 1
Paelopatides28956-
Paelopatides28957-
Paelopatides28958ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides28959LRP2-BINDING PROTEIN
Paelopatides28960-
Paelopatides28961-
Paelopatides28962-
Paelopatides28963JNK1/MAPK8-ASSOCIATED MEMBRANE PROTEIN
Paelopatides28964-
Paelopatides28965-
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