About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29441ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides29442PROTEIN CBG26694
Paelopatides29443ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides29444-
Paelopatides29445PROTEIN CBG26694
Paelopatides29446EXPRESSED PROTEIN
Paelopatides29447ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides29449CENTROSOMAL PROTEIN 2
Paelopatides29450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29451-
Paelopatides29452-
Paelopatides29453REVERSE TRANSCRIPTASES
Paelopatides29454-
Paelopatides29455REVERSE TRANSCRIPTASE
Paelopatides29456-
Paelopatides29457-
Paelopatides29458-
Paelopatides29459-
Paelopatides29460ADP RIBOSYLATION FACTOR-RELATED
Paelopatides29461PROTEIN FAM167A
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