About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29462CRUMBS FAMILY MEMBER
Paelopatides29463EXPRESSED PROTEIN
Paelopatides29464TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED
Paelopatides29465ENDONUCLEASE
Paelopatides29466ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides29467SI:CH211-196P9.1-RELATED
Paelopatides29468SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides29469PROTEIN CBG26694
Paelopatides29470PAXIP1-ASSOCIATED GLUTAMATE-RICH PROTEIN 1
Paelopatides29471SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides29472ENDONUCLEASE-RELATED
Paelopatides29473WD REPEAT-CONTAINING PROTEIN 36
Paelopatides29474-
Paelopatides29475PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides29476-
Paelopatides29477PR DOMAIN ZINC FINGER PROTEIN
Paelopatides29478ALPHA-CATULIN
Paelopatides29479ALPHA-CATULIN
Paelopatides29480-
Paelopatides29481HL07962P-RELATED
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