About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29401PHOSPHOHEXOMUTASE FAMILY MEMBER
Paelopatides29402-
Paelopatides29403EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
Paelopatides29404PHOSPHOHEXOMUTASE FAMILY MEMBER
Paelopatides29405PHOSPHOHEXOMUTASE FAMILY MEMBER
Paelopatides2940640S RIBOSOMAL PROTEIN S10
Paelopatides29407UNCHARACTERIZED
Paelopatides29408UNCHARACTERIZED
Paelopatides29409-
Paelopatides29410-
Paelopatides29411-
Paelopatides29412DNA HELICASE RECQ FAMILY MEMBER
Paelopatides29413ENDONUCLEASE
Paelopatides29414-
Paelopatides29415SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 2
Paelopatides29416L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides29417NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
Paelopatides29418FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides29419PROTEIN CBG26694
Paelopatides29420F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
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